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Crystal structures of a poplar thioredoxin peroxidase that exhibits the structure of glutathione peroxidases: insights into redox-driven conformational changes.

Identifieur interne : 003C17 ( Main/Exploration ); précédent : 003C16; suivant : 003C18

Crystal structures of a poplar thioredoxin peroxidase that exhibits the structure of glutathione peroxidases: insights into redox-driven conformational changes.

Auteurs : Cha San Koh [France] ; Claude Didierjean ; Nicolas Navrot ; Santosh Panjikar ; Guillermo Mulliert ; Nicolas Rouhier ; Jean-Pierre Jacquot ; André Aubry ; Omar Shawkataly ; Catherine Corbier

Source :

RBID : pubmed:17531267

Descripteurs français

English descriptors

Abstract

Glutathione peroxidases (GPXs) are a group of enzymes that regulate the levels of reactive oxygen species in cells and tissues, and protect them against oxidative damage. Contrary to most of their counterparts in animal cells, the higher plant GPX homologues identified so far possess cysteine instead of selenocysteine in their active site. Interestingly, the plant GPXs are not dependent on glutathione but rather on thioredoxin as their in vitro electron donor. We have determined the crystal structures of the reduced and oxidized form of Populus trichocarpaxdeltoides GPX5 (PtGPX5), using a selenomethionine derivative. PtGPX5 exhibits an overall structure similar to that of the known animal GPXs. PtGPX5 crystallized in the assumed physiological dimeric form, displaying a pseudo ten-stranded beta sheet core. Comparison of both redox structures indicates that a drastic conformational change is necessary to bring the two distant cysteine residues together to form an intramolecular disulfide bond. In addition, a computer model of a complex of PtGPX5 and its in vitro recycling partner thioredoxin h1 is proposed on the basis of the crystal packing of the oxidized form enzyme. A possible role of PtGPX5 as a heavy-metal sink is also discussed.

DOI: 10.1016/j.jmb.2007.04.031
PubMed: 17531267


Affiliations:


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Le document en format XML

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<term>Binding Sites (MeSH)</term>
<term>Cadmium (metabolism)</term>
<term>Crystallography, X-Ray (MeSH)</term>
<term>Cysteine (metabolism)</term>
<term>Glutathione Peroxidase (chemistry)</term>
<term>Glutathione Peroxidase (metabolism)</term>
<term>Humans (MeSH)</term>
<term>Models, Molecular (MeSH)</term>
<term>Molecular Sequence Data (MeSH)</term>
<term>Oxidation-Reduction (MeSH)</term>
<term>Peroxidases (chemistry)</term>
<term>Peroxidases (genetics)</term>
<term>Peroxidases (metabolism)</term>
<term>Peroxiredoxins (MeSH)</term>
<term>Plant Proteins (chemistry)</term>
<term>Plant Proteins (genetics)</term>
<term>Plant Proteins (metabolism)</term>
<term>Populus (enzymology)</term>
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<term>Protein Structure, Secondary (MeSH)</term>
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<term>Protein Subunits (chemistry)</term>
<term>Protein Subunits (genetics)</term>
<term>Protein Subunits (metabolism)</term>
<term>Sequence Alignment (MeSH)</term>
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<term>Alignement de séquences (MeSH)</term>
<term>Animaux (MeSH)</term>
<term>Cadmium (métabolisme)</term>
<term>Cristallographie aux rayons X (MeSH)</term>
<term>Cystéine (métabolisme)</term>
<term>Données de séquences moléculaires (MeSH)</term>
<term>Glutathione peroxidase (composition chimique)</term>
<term>Glutathione peroxidase (métabolisme)</term>
<term>Humains (MeSH)</term>
<term>Modèles moléculaires (MeSH)</term>
<term>Oxydoréduction (MeSH)</term>
<term>Peroxidases (composition chimique)</term>
<term>Peroxidases (génétique)</term>
<term>Peroxidases (métabolisme)</term>
<term>Peroxirédoxines (MeSH)</term>
<term>Pliage des protéines (MeSH)</term>
<term>Populus (enzymologie)</term>
<term>Protéines végétales (composition chimique)</term>
<term>Protéines végétales (génétique)</term>
<term>Protéines végétales (métabolisme)</term>
<term>Sites de fixation (MeSH)</term>
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<term>Sous-unités de protéines (génétique)</term>
<term>Sous-unités de protéines (métabolisme)</term>
<term>Structure quaternaire des protéines (MeSH)</term>
<term>Structure secondaire des protéines (MeSH)</term>
<term>Structure tertiaire des protéines (MeSH)</term>
<term>Séquence d'acides aminés (MeSH)</term>
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<term>Peroxidases</term>
<term>Plant Proteins</term>
<term>Protein Subunits</term>
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<term>Protein Subunits</term>
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<term>Cysteine</term>
<term>Glutathione Peroxidase</term>
<term>Peroxidases</term>
<term>Plant Proteins</term>
<term>Protein Subunits</term>
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<term>Protéines végétales</term>
<term>Sous-unités de protéines</term>
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<term>Glutathione peroxidase</term>
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<term>Binding Sites</term>
<term>Crystallography, X-Ray</term>
<term>Humans</term>
<term>Models, Molecular</term>
<term>Molecular Sequence Data</term>
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<div type="abstract" xml:lang="en">Glutathione peroxidases (GPXs) are a group of enzymes that regulate the levels of reactive oxygen species in cells and tissues, and protect them against oxidative damage. Contrary to most of their counterparts in animal cells, the higher plant GPX homologues identified so far possess cysteine instead of selenocysteine in their active site. Interestingly, the plant GPXs are not dependent on glutathione but rather on thioredoxin as their in vitro electron donor. We have determined the crystal structures of the reduced and oxidized form of Populus trichocarpaxdeltoides GPX5 (PtGPX5), using a selenomethionine derivative. PtGPX5 exhibits an overall structure similar to that of the known animal GPXs. PtGPX5 crystallized in the assumed physiological dimeric form, displaying a pseudo ten-stranded beta sheet core. Comparison of both redox structures indicates that a drastic conformational change is necessary to bring the two distant cysteine residues together to form an intramolecular disulfide bond. In addition, a computer model of a complex of PtGPX5 and its in vitro recycling partner thioredoxin h1 is proposed on the basis of the crystal packing of the oxidized form enzyme. A possible role of PtGPX5 as a heavy-metal sink is also discussed.</div>
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<AbstractText>Glutathione peroxidases (GPXs) are a group of enzymes that regulate the levels of reactive oxygen species in cells and tissues, and protect them against oxidative damage. Contrary to most of their counterparts in animal cells, the higher plant GPX homologues identified so far possess cysteine instead of selenocysteine in their active site. Interestingly, the plant GPXs are not dependent on glutathione but rather on thioredoxin as their in vitro electron donor. We have determined the crystal structures of the reduced and oxidized form of Populus trichocarpaxdeltoides GPX5 (PtGPX5), using a selenomethionine derivative. PtGPX5 exhibits an overall structure similar to that of the known animal GPXs. PtGPX5 crystallized in the assumed physiological dimeric form, displaying a pseudo ten-stranded beta sheet core. Comparison of both redox structures indicates that a drastic conformational change is necessary to bring the two distant cysteine residues together to form an intramolecular disulfide bond. In addition, a computer model of a complex of PtGPX5 and its in vitro recycling partner thioredoxin h1 is proposed on the basis of the crystal packing of the oxidized form enzyme. A possible role of PtGPX5 as a heavy-metal sink is also discussed.</AbstractText>
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